Biomolecular & Metabolic Engineering Laboratories
 

Publications

Year:   2008 / 2007 / 2006 / 2005 / 2004 / 2003 / 2002 / 2001 / 2000 / 1999 / 1998 / 1997 / 1996 / 1995 /
               1994 / 1993 / 1992 and earlier
2008
  1. Fernandes R, Bentley WE. (2008). AI-2 biosynthesis module in a magnetic nanofactory alters bacterial response via localized synthesis and delivery. Biotechnol Bioeng. 2008 Aug 8. [Epub ahead of print]
  2. Nde CW, Jang HJ, Toghrol F, Bentley WE. (2008). Toxicogenomic response of Pseudomonas aeruginosa to ortho-phenylphenol. BMC Genomics. 2008 Oct 10;9(1):473. [Epub ahead of print]
  3. Jang HJ, Nde C, Toghrol F, Bentley WE. (2008). Microarray analysis of toxicogenomic effects of ortho-phenylphenol in Staphylococcus aureus. BMC Genomics. 2008 Sep 15;9:411.
  4. Hebert CG, Valdes JJ, Bentley WE. (2008). Beyond silencing-engineering applications of RNA interference and antisense technology for altering cellular phenotype. Curr Opin Biotechnol. 2008 Sep 25. [Epub ahead of print]
  5. Fernandes R, Bentley WE. (2008). AI-2 biosynthesis module in a magnetic nanofactory alters bacterial response via localized synthesis and delivery. Biotechnol Bioeng. 2008 Aug 8. [Epub ahead of print]
  6. Shi XW, Liu Y, Lewandowski AT, Wu LQ, Wu HC, Ghodssi R, Rubloff GW, Bentley WE, Payne GF. Chitosan. (2008). biotinylation and electrodeposition for selective protein assembly. Macromol Biosci. 2008 May 13;8(5):451-7.
  7. Shi XW, Wu HC, Liu Y, Tsao CY, Wang K, Kobatake E, Bentley WE, Payne GF. (2008). Chitosan fibers: versatile platform for nickel-mediated protein assembly. Biomacromolecules. 2008 May;9(5):1417-23. Epub 2008 Apr 10.
  8. Jang HJ, Chang MW, Toghrol F, Bentley WE. (2008). Microarray analysis of toxicogenomic effects of triclosan on Staphylococcus aureus. Appl Microbiol Biotechnol. 2008 Mar;78(4):695-707. Epub 2008 Jan 22.
  9. Luo X, Lewandowski AT, Yi H, Payne GF, Ghodssi R, Bentley WE, Rubloff GW. (2008). Programmable assembly of a metabolic pathway enzyme in a pre-packaged reusable bioMEMS device. Lab Chip. 2008 Mar;8(3):420-30. Epub 2008 Jan 14.
  10. Lewandowski AT, Yi H, Luo X, Payne GF, Ghodssi R, Rubloff GW, Bentley WE. (2008). Protein assembly onto patterned microfabricated devices through enzymatic activation of fusion pro-tag. Biotechnol Bioeng. 2008 Feb 15;99(3):499-507.
2007
  1. Chang MW, Toghrol F, Bentley WE. (2007). Toxicogenomic response to chlorination includes induction of major virulence genes in Staphylococcus aureus. Environ Sci Technol. 2007 Nov 1;41(21):7570-5.
  2. Lee, J., Bansal, T., Jayaraman, A., Bentley, W.E., and T.K. Wood (2007). Enterohemorrhagic Escherichia coli Biofilms are Inhibited by 7-Hydroxyindole and Stimulated by Isatin, Applied and Environmental Microbiology. Abstract
  3. Yung, C.W., Tullman, J.A., Payne, G.F., Bentley, W.E., and T.A. Barbari (2007). Transglutaminase Crosslinked Gelatin as a Tissue Engineering Scaffold, Journal of Biomedical Materials Research A. Abstract
  4. Li, J., Attila, C., Wang, L., Wood, T.K., Valdes, J.J., and W.E. Bentley (2007). Quorum Sensing in E. coli is Signaled by AI-2/LsrR: Effects on sRNA and Biofilm Architecture, Journal of Bacteriology, 73:4100-4109. Abstract
  5. Fernandes, R., Tsao, C.Y., Hashimoto, Y., Wang, L., Wood, T.K., Payne, G.F., and W.E. Bentley (2007). Magnetic Nanofactories: Localized Synthesis and Delivery of Quorum-Sensing Signaling Molecule Autoinducer-2 to Bacterial Cell Surfaces, Metabolic Engineering, 9:228-239. Abstract
  6. Small, D.A., Chang, W., Bentley, W.E., and F. Toghrol (2007). Toxicogenomic Analysis of Sodium Hypochlorite Antimicrobial Mechanisms in Pseudomonas aeruginosa, Applied Microbiology and Biotechnology, 74:176-185. Abstract
  7. Kim, E.J., Kramer, S.F., Hebert, C.G., Valdes, J.J., and W.E. Bentley (2007). Metabolic Engineering of the Baculovirus-Expression System via Inverse “Shotgun” Genomic Analysis & RNA Interference (dsRNA) Increases Product Yield and Cell Longevity, Biotechnology and Bioengineering, 98:645-654. Abstract
  8. March, J.C., and W.E. Bentley (2007). RNAi-based Tuning of Cell Cycling in Drosophila S2 cells- effects on Recombinant Protein Yield, Applied Microbiology and Biotechnology, 73: 1128-1135. Abstract
  9. Koev, S.T., Powers, M. A. Powers, Yi, H.M.,  Wu, L-Q., Bentley, W.E., Rubloff, G.W., Payne, G.F., and R. Ghodssi, (2007). Mechano-transduction of DNA Hybridization and Dopamine Oxidation through Electrodeposited Chitosan Network, Lab on a Chip, 7:103-111. Abstract
  10. Small, D.A, Chang, W., Toghrol, F., and W.E. Bentley (2007). Comparative Global Transcription Analysis of Sodium Hypochlorite, Peracetic Acid, and Hydrogen Peroxide on Pseudomonas aeruginosa, Applied Microbiology and Biotechnology, 76:1093-1105. Abstract
  11. O’Connell, K.P., Kovaleva, E., Campbell, J.H., Anderson, P.E., Brown, S.G., Davis, D.C., Valdes, J.J., Welch, R.W., Bentley, W.E. and N.A. van Beek (2007). Production of a Recombinant Antibody Fragment in Whole Insect Larvae, Molecular Biotechnology, 36:44-51. Abstract
  12. Hung, C-W., Holoman, T.R.P., Kofinas, P., and W.E. Bentley (2007). Towards Oriented Assembly of Proteins onto Magnetic Nanoparticles, Biochemical Engineering Journal.
  13. Saini, S.S., Stanford, C., Lee, S.M., Park, J., DeShong, P., Bentley, W.E., and Dagenais, M. (2007). Monolayer Detection of Biochemical Agents Using Etched-Core Fiber Bragg Grating Sensors, IEEE Photonics Technology Letters, 19:1341-1343. Abtract
  14. Lewandowski, A.T., Yi, H., Luo, X., Payne, G.F., Ghodssi, R., Rubloff, G.W., and W.E. Bentley (2007). Protein Assembly onto Patterned Microfabricated Devices through Enzymatic Activation of Fusion Pro-tag. Biotechnology and Bioengineering. Abstract
  15. March, J.C., and W.E. Bentley (2007). Methods for gene silencing with RNAi, Methods in Molecular Biology, 388:424-434. Abstract
  16. Hu, Y.C., and W.E. Bentley (2007). Alternative Bioreactor Strategy for Probing Infection and Production, Methods in Molecular Biology, 388:419-426. Abstract
  17. Cha, H.J., and W.E. Bentley (2007). Monitoring and Visualization of Baculovirus Infection Using Green Fluorescent Protein Strategy, Methods in Molecular Biology, 388:407-418. Abstract
2006
  1. Lewandowski, A.T., Small, D.A., Chen, T., Payne, G.F., and W.E. Bentley (2006) Tyrosine-based “activatable pro-tag”: enzyme-catalyzed protein capture and release, Biotechnology and Bioengineering, 93:1207-1215.
  2. Chang, W., Small, D.A., Toghrol, F., and W.E. Bentley (2006) Global Transcriptome Analysis of Staphylococcus aureus Response to Hydrogen Peroxide, Journal of Bacteriology, 188:1648-1659.
  3. Gonzalez Barrios, A.F., Zuo R., Hashimoto, Y., Yang, L., Bentley W.E., and T.K. Wood (2006) Autoinducer 2 Controls Biofilm Formation in Escherichia coli Through a Novel Motility Quorum-sensing Regulator (MqsR, B3022), Journal of Bacteriology, 188:205-316.
  4. Bleckwenn, N. A. and Bentley, W. E. (2006) Systems and Technology Involving Bacteria, In CRC BME Handbook: Tissue Engineering and Artificial Organs (JD Bronzino, ed.) CRC Press, Boca Raton, FL, 2.1-2.10.
  5. Yung, C., Barbari, T.A., and W.E. Bentley (2006) Integrated Non-Invasive System for Quantifying Secreted Human Therapeutic hIL2, Biotechnology and Bioengineering.
  6. Yang, L., Portugal, F.H., and W.E. Bentley (2006) Conditioned Medium from Listeria innocua Stimulate Emergence from a Resting State not in Response to Quorum Sensing Autoinducer AI-2, Biotechnology Progress, 22:387-393.
  7. March, J.C., and W.E. Bentley (2006) Engineering Eukaryotic Signal Transduction with RNAi: Enhancing Drosophila S2 Cell Growth and Recombinant Protein Synthesis via Silencing of TSC1. Biotechnology and Bioengineering.
  8. Park, J.J., Valentine, T.M., Yi, H., Payne, G.F., Bentley, W.E., Ghodssi, R., and Gary W. Rubloff (2006) In situ Biomolecule Assembly in Completely Packaged Microfluidic Devices, Lab on a Chip.
  9. Yung, C.W., Barbari, T.A., and W.E. Bentley (2006) Counteracting Apoptosis and Necrosis with Hypoxia Responsive Expression of Bcl-2D, Metabolic Engineering.
  10. Cresce, A.V., Silverstein, J.S., Bentley, W.E., and P. Kofinas (2006) Nanopatterning of Recombinant Proteins using Block Copolymer Templates, Macromolecules, 39, 5826-5829.
  11. Dalal, N.G., Cha, H.J., Kramer, S.F., Kostov, Y., Rao, G. and W.E. Bentley (2006) Rapid Non-invasive Monitoring of Baculovirus Infection for Insect Larvae Using Green Fluorescent Protein Reporter Under Early-to-Late Promoter and a GFP-Specific Optical Probe, Process Biochemistry, 41:947-950.
  12. Li, J., Wang, L., Hashimoto, Y., Tsao, C-Y., Wood, T.K., Valdes, J.J., Zafiriou, E., and W.E. Bentley (2006) Stochastic Model of E. coli AI-2 Quorum Signal Circuit Reveals Alternative Synthesis Pathways, Nature Molecular Systems Biology.
2005
  1. Wang, L., Hashimoto, Y., Tsao, C.-Y., Valdes, J.J., and W.E. Bentley (2005) cAMP and cAMP Receptor Protein (CRP) Influence Both Synthesis and Uptake of Extracellular Autoinducer-2 in Escherichia coli, Journal of Bacteriology, 187:2066-76.
  2. Yi, H., Wu, L.Q., Rubloff, G.W., Ghodssi, R., Payne, G.F., and Bentley, W.E., (2005) Signal-Directed Sequential Assembly of Biomolecules on Patterned Surfaces. Langmuir, 2:2104-2107.
  3. Tao, Y., Bentley, W.E., and T.K. Wood, (2005) Regiospecific Oxidation of Naphthalene and Fluorene by Toluene Monooxygenase and Engineered Toluene 4-Monooxygenase of Pseudomonas mendocina KR1, Biotechnology and Bioengineering, 90:85-94.
  4. Cha, H.J., Shin, H.S., Lim, H.J., Cho, H.S., Dalal, N.N., Pham, M.Q., and W.E. Bentley (2005) Comparative Production of Human Interleukin-2 Fused with Green Fluorescent Protein in Several Recombinant Expression Systems, Biochemical Engineering Journal, 24:225-233.
  5. Lu CH, Albano CR, Bentley WE, and G. Rao (2005) Quantitative and kinetic study of oxidative stress Regulons using green fluorescent protein, Biotechnology and Bioengineering, 89: 574-587.
  6. Bleckwenn, N. A., Bentley, W. E., Shiloach, J., (2005) Vaccinia Virus-Based Expression of gp120 and EGFP: Survey of Mammalian Host Cell Lines, Biotechnology Progress, 21:186-191.
  7. Bleckwenn, N. A., Bentley, W. E., Shiloach, J., (2005) Evaluation of Production Parameters with the Vaccinia Virus Expression System Using Microcarrier Attached HeLa Cells, Biotechnology Progress, 21:554-561.
  8. Bleckwenn, N. A., Bentley, W. E., Shiloach, J., (2005) Production of Recombinant Protein Using the HeLa S3-Vaccinia Virus Expression System: Bioreactor Perfusion and Effects of Post-Infection Temperature, Journal of Bioscience, Biotechnology and Biochemistry, 69:1065-1072.
  9. Bleckwenn, N. A., Golding, H., Bentley, W. E., Shiloach, J., (2005) Production of Recombinant Proteins by Vaccinia Virus in a Microcarrier Based Mammalian Cell Perfusion Bioreactor, Biotechnology and Bioengineering, 90:663-674.
  10. Tao, Y, Bentley, W.E., and T.K. Wood (2005) Phenol and 2-Naphthol Production by Toluene 4-Monooxygenases Using an Aqueous/Dioctyl Phthalate system, Applied Microbiology & Biotechnology, 68:614-621.
  11. Dalal, N.G., Bentley, W.E., and H.J. Cha (2005) Facile Monitoring of Baculovirus Infection for Foreign Protein Expression under Very Late Polyhedrin Promoter using Green Fluorescent Protein Reporter under Early-to-Lte Promoter, Biochemical Engineering Journal, 24:27-30.
  12. Cha, H.J., Dalal, N.G., and W.E. Bentley (2005) Secretion of Human Interleukin-2 Fused with Green Fluorescent Protein in Recombinant Pichia pastoris, Applied Biochemistry and Biotechnology, 126:1-11.
  13. Powers, M.A., S. T. Koev, A. Schleunitz, H. Yi, V. Hodzic, W. E. Bentley, G. F. Payne, G. W. Rubloff, and R. Ghodssi (2005) Integrated Optical Sensing of Biofunctionalized Sites in BioMEMS, Lab on a Chip, 5:583-586.
  14. Chryssis, A.N., Saini, S.S., Lee, S.M., Yi, H.M., Bentley, W.E., and M. Dagenais (2005) Detecting Hybridization of DNA by Highly Selective Evanescent Field Etched Core Fiber Bragg Grating Sensors, IEEE Journal of Selected Topics in Quantum Electronics, 11:864-872.
  15. Chang, W., Small, D.A. Toghrol, F., and W.E. Bentley (2005) Microarray Analysis of Toxicogenomic Effects of Peracetic Acid on Pseudomonas aeruginosa, Environmental Science & Technology, 39:5893-5899.
  16. Chang, W., Small, D.A., Toghrol, F., and W.E. Bentley (2005) Microarray Analysis of Pseudomonas aeruginosa Reveals Induction of Pyocin Genes in Response to Hydrogen Peroxide, BMC Genomics, 6.115-129.
  17. Yi, H., Nisar, S., Lee, SY, Powers, MA, Bentley, WE., Payne, GF, Ghodssi, R., Rubloff, GW, Harris, MT, Culver, JN (2005) Patterned Assembly of Genetically Modified Viral Nanotemplates via Nucleic Acid Hybridization, Nano Letters, 5:1031-1936.
  18. Wang, L., Li, J., March, J.C., Valdes, J.J., and W.E. Bentley (2005), luxS-Dependent Gene Regulation in Escherichia coli K-12 Revealed by Genomic Expression Profiling, Journal of Bacteriology, 187:8350-8360.
  19. Yi, H., Wu, L.Q., Bentley, W.E., Ghodssi, R., Rubloff, G.W., Culver, J.N., Payne, G.F., (2005) Biofabrication with Chitosan, Biomacromolecules, 6:2881-2894.
2004
  1. March, J.C. and W.E. Bentley (2004) Insulin stimulates dsRNA uptake in Drosophila S2 cells, BioTechniques, 37:898-890.
  2. Mohaddes-Ardabili, L., Martinez-Miranda, L.J., Salamanca-Riba,LG., Christou, A., Silverman, J., Bentley, W.E., and M. Al-Sheikhly(2004) Preferred Orientation of DNA Oligonucleotide Probes on the (2x4)Reconstructed Surface of (001) GaAs, Journal of Applied Physics, 95:6021-6024.
  3. Lu, C., Bentley, W.E., and G. Rao(2004) A High Throughput Approach to Promoter Study Using Green Fluorescent Protein, Biotechnology Progress, 20:1634-1640.
  4. Tao Y, Fishman A, Bentley WE, and T.K. Wood (2004) Altering toluene 4-monooxygenase by active-site engineering for the synthesis of 3-methoxycatechol, methoxyhydroquinone, and methylhydroquinone, Journal of Bacteriology, 186:4705-13.
  5. March, J.C. and W.E. Bentley (2004) Quorum sensing and bacterial cross-talk in biotechnology, Current Opinion in Biotechnology, 15(5):495-502.
  6. Fishman A, Tao Y, Bentley WE, and T.K. Wood (2004) Protein engineering of toluene 4-monooxygenase of Pseudomonas mendocina KR1 for synthesizing 4-nitrocatechol from nitrobenzene, Biotechnology & Bioengineering, 87(6):779-90.
  7. Tao, Y., Fishman, A., Bentley, W.E., and T.K. Wood (2004) Oxidation of Benzene to Catechol and 1,2,3-Trihydroxybenzene by Toluene 4-Monooxygenase of Pseudomonas mendocina KR1 and Toluene 3-Monooxygenase of Ralstonia pickettii PKO1, Applied & Environmental Microbiology, 7:3814-3820.
  8. Cha, H.J., Dalal, N.G., and W.E. Bentley (2004) In vivo Monitoring of Human Interleukin-2 using Green Fluorescent Protein Fusion Partner in Pichia Pastoris, Biotechnology letters, 26:1157-1162.
  9. Yi, H., Wu, L.Q., Ghodssi, R., Rubloff, G.W., Payne, G.F., and W.E. Bentley (2004) A Robust Technique for Assembly of Nucleic Acid Hybridization Chips Based on Electrochemically Templated Chitosan, Analytical Chemistry, 76:365-372.
  10. Fernandes,R., Yi, H., Wu, L.Q., Rubloff, G.w., Ghodssi, R., Bentley, W.E., and G.F. payne (2004) Thermo-Biolithography: A Technique for Patterning Nucleic Acids and Proteins, Langmuir, 20:906-913.
2003
  1. Chen, T., Small, D.A., Wu, L.Q., McDermot, M.K., Bentley, W.E., and G.F. Payne (2003) Enzymatic Methods for in Situ Entrapment and Cell Release, Biomacromolecules, 4:1558-1563.
  2. Kastantin MJ, Li S, Gadre AP, Wu LQ, Bentley, WE, Payne GF, Rubloff GW, Ghodssi R (2003) Integrated fabrication of polymeric devices for biological applications, Sensors and Materials, 15(6):295-311.
  3. Chen, T., Yi, H., Rubloff, G.W., Ghodssi, R., Bentley, W.E., and G.F. Payne (2003) Nature-inspired Creation of Protein-polysaccharide Conjugate and its Subsequent Assembly onto a Patterned Surface, Langmuir, 19:9382-9386.
  4. Lu, C., Bentley, W.E., and G. Rao (2003) Comparisons of Oxidative Stress Respponse Genes in Aerobic Escherichia coli Fermentations, Biotechnology and Bioengineering, 83:864-870.
  5. Mohaddes-Ardabili, L., Martinez-Miranda, L.J., Silverman, J., Christou, A., Salamanca-Riba, L.G., Bentley, W.E., Ohuchi, F., and M. Al-Sheikhly (2003) Attachment of DNA probes on gallium arsenide surface, Applied Physics letters, 83:192-194.
  6. Fernandes, R., Wu, L.Q., Chen, T., Yi, H., Rubloff, G.W., Ghodssi, R., Bentley, W.E., and G.F.Payne (2003) Electrochemically-Induced Deposition of a Polysaccharide Hydrogel onto a Patterned Surface, Langmuir, 19:4058-4062.
  7. Kramer, S.F., and W.E. Bentley (2003) RNA Interference as a Metabolic Engineering Tool: Potential for in vivo Control of Protein Expression in an Insect Larval Model, Metabolic Engineering, 5:183-190.
  8. Wu, C.F.,Bentley, W.E., Valdes, J.J., and J.W. Sekowski (2003) DNA microarray for discrimination between pathogeic O157:H7 EDL933 and non-pathogenic Escherichia coli strains, Biosensors and Bioelectronics, 19:1-8.
  9. March, J.C., Rao, G., and W.E. Bentley (2003) Biotechnological Applications of Green Florescent Protein, Applied Microbiology and Biotechnology, 62:303-315.
  10. Bleckwenn, N.A., Bentley, W.E., and J. Shiloach (2003) Investigating Protein Production Strategies with Recombinant Vaccinia virus, Biotechnology Progress, 19:130-136.
  11. Hyunmin Yi, H., Wu, L.Q., Sumner, J.J., Gillespie, J.B., Payne, G.F.,and W.E. Bentley (2003) Chiosan Scaffolds for Biomolecular Assembly: Coupling Nucleic Acid Probes for Detecting Hybridization, Biotechnology and Bioengineering, 83:646-652.
  12. Kramer, S.F., Kostov, Y., Rao, G., and W.E. Bentley (2003) Ex Vivo Monitoring of Protein Production in Baculovirus-Infected Trichoplusia ni Larvae with a GFP-Specific Optical Probe, Biotechnology and Bioengineering, 83:241-247.
2002
  1. Lu, C., Albano, C.R., Bentley, W.E., and G. Rao (2002) Differential Rates of Gene Expression Monitored by Green Fluorescent Protein, Biotechnology and Bioengineering, 79:429-37.
  2. DeLisa, M.P., and W. E. Bentley (2002) Bacterial Autoinduction: Looking Outside the Cell for New Metabolic Engineering Targets, Microbial Cell Factories, 1:5-12.
  3. Wu, Li-Qun, Yi, H., Li, S., Rubloff, G.W., Bentley, W.E., Ghodssi, R.,and G.F. Payne, (2002) Spatially-selective Deposition of a Reactive Polysaccharide Layer onto a Patterned Template, Langmuir, 19:519-524.
  4. Wu, Li-Qun, Gadre, A.P, Yi, Hyunmin, Kastantin, M.J., Rubloff, G.W., Bentley, W.E., Payne, G.F., and Reza Ghodssi, (2002) Voltage-dependent Assembly of the Polysaccharide Chitosan onto an Electrode Surface, Langmuir, 8:8620-8625.
  5. Li, J., Xu, H., Herber, W.K., Bentley, W.E., and G. Rao (2002) Integrated Bioprocessing in Saccharomyces cerevisiae Using Green Fluorescent Protein as a Fusion Partner, Biotechnology and Bioengineering, 79:682-693.
  6. Li, J., Xu, H., Bentley, W.E. and Rao, G. (2002) Impediments to Secretion of Green Fluorescent Protein and its Fusion from Saccharomyces cerevisiae, Biotechnology Progress, 18:831-838.
  7. Wu, C.F., Cha, H.J., Valdes, J.J., and W. E. Bentley (2001) GFP-Immobilized Enzymes: Degradation of Paraoxon via Organophosphorous Hydrolase in a Packed Column, Biotechnology and Bioengineering, 77:212-218.
  8. Cha, H.J., Dalal, N.G., Pham, M.-Q., Kramer, S.F., Vakharia, V.N., and W.E. Bentley (2002) Monitoring Foreign Protein Expression from Baculovirus p10 and polh Promoters in Insect Larvae, BioTechniques, 35:986-991 .
2001
  1. Wu, C.F., Valdes, J.J., Rao, G., and W.E. Bentley (2001) Enhancement of Organophosphorus Hydrolase Yield in E. coli Using Multiple Gene Fusions, Biotechnology and Bioengineering, 75:100-103.
  2. Gotoh, T., Miyazaki, Y., Sato, W., Kikuchi, K.-I., and Bentley, W. E.(2001) Proteolytic Activity and Recombinant Protein Production of Virus-infected Sf-9 Insect Cell Culture Supplemented with Cysteine Protease and Carboxyl Protease Inhibitors, Journal of Bioscience and Bioengineering, 92:248-255 .
  3. Cho, H.S., Shin, H.S., Bentley, W.E., and H. J. Cha (2001) Partial Recovery of Cell Membrane Bounded Human Interleukin-2 Fusion Protein from Insect Cell Debris by Using Various Detergent Extractions, Biotechnology Letters, 23:1957-1961 .
  4. DeLisa, M.P., Gill, R.T., and W.E. Bentley (2001) Mapping Stresses in Escherichia coli to Improve Yield, EFB Recombinant Protein Production, Kluwer Academic Publishers, pp.43-54 .
  5. Hu, Y.-C., and W. E. Bentley (2001) The Effect of MOI Ratio on the Composition and Yield of Chimeric Infectious Bursal Disease Virus-like Particles by Baculovirus Co-infection: Deterministic Predictions and Experimental Results, Biotechnology and Bioengineering, 75:104-119.
  6. Srivastava, R., Peterson, M.S., and W.E. Bentley (2001) Stochastic Kinetic Analysis of the Escherichia coli Stress Circuit Using s32 Targeted Antisense, Biotechnology and Bioengineering, 75:120-129.
  7. 78. Wu, C.F., Valdes, J.J. and W.E. Bentley (2001) Effects of in situ Cobalt Ion Addition on the Activity of a GFP-OPH Fusion Protein: The Fermentation Kinetics, Biotechnology Progress, 17:606-611.
  8. DeLisa, M.P., Chae, H.J., Rao, G., Weigand, W.A., Valdes, J.J., and W.E. Bentley (2001) Generic Model Control of Induced Protein Expression in High Cell Density Cultivation of Escherichia coli Using On-line GFP-Fusion Monitoring. Bioprocess and Biosystems Engineering, 24:83-91.
  9. Lee, T.S., Chan, S.H., Weigand, W.A., and W.E. Bentley (2001) A Metabolic Model for Thiodiglycol Degradation: Capacity Constraint Leads to Byproduct Accumulation. Bioprocess and Biosystems Engineering, 24:33-38.
  10. Albano, C. R., Lu, Canghai, Bentley, W.E., and Govind Rao. (2001) High Throughput Studies of Gene Expression Using Green Fluorescent Protein-Oxidative Stress Promoter Probe Constructs: The Potential for Living Chips. J. Biomolecular Screening. 6:421-428.
  11. DeLisa, M.P., Valdes, J.J., and W.E. Bentley (2001) Quorum Signaling via AI-2 Communicates the “Metabolic Burden?Associated with Heterologous Protein Expression in Escherichia coli. Biotechnology and Bioengineering, 75:439-450.
  12. DeLisa, M.P., Wu, C.F., Wang, L., Valdes, J.J., and W.E. Bentley (2001) DNA Microarray-Based Identification of Genes Controlled by AI-2-stimulated Quorum Sensing in Escherichia coli. Journal of Bacteriology. 183:5239-5247.
  13. Gotoh, T., Miyazaki, Y., Kikuchi, KI, and W.E. Bentley (2001) Investigation of Sequential Behavior of Carboxyl Protease and Cysteine Protease Activities in Virus-infected Sf-9 Insect Cell Culture by Inhibition Assay, Applied Microbiology and Biotechnology ,56:742-749.
  14. Gill, R.T., DeLisa, M.P., Valdes, J.J., and W.E. Bentley (2001) Genomic Analysis of High Cell Density Recombinant Escherichia coli Fermentation and “Cell Conditioning?for Improved Recombinant Protein Yield. Biotechnology and Bioengineering, 72: 85-95.
  15. DeLisa, M.P., Valdes, J.J., and W.E. Bentley (2001) Mapping Stress-Induced Changes in Autoinducer AI-2 Production in Chemostat Cultivated Escherichia coli K-12, Journal of Bacteriology, 183:2918-2928.
  16. Chen, T., Vazquez-Duhalt, R., Wu, C.F., Bentley, W.E., and G.F. Payne (2001) Combinatorial Screening for Enzyme-mediated Coupling. Tyrosinase-Catalyzed Coupling to Create Protein-Chitosan Conjugates, Biomacromolecules. 2:456-452.
2000
  1. Cha, H.J., Wu, C.-F., Valdes, J.J., Rao, G., and W. E. Bentley (2000) Observations of Green Fluorescent Protein as a Fusion Partner in Genetically Engineered Escherichia coli: Monitoring Protein Expression and Solubility, Biotechnology and Bioengineering, 67:565-574.
  2. Wu, C.-F., Cha, H.J., Rao, G., Valdes, J.J., and W. E. Bentley (2000) A Green Fluorescent Protein Fusion Strategy for Monitoring the Expression, Cellular Localization, and Separation of Biologically Active Organophosphorous Hydrolase, Applied Microbiology and Biotechnology, 54:78-83.
  3. Hu, Y.C., and W. E. Bentley (2000) A Kinetic and Statistical Thermodynamics-based Model for Baculovirus Infection and Virus-like Particle Assembly, Chemical Engineering Science, 55:3991-4008.
  4. Chae, H.J., DeLisa, M.P., Cha, H.J., Weigand, W.A., Rao, G., and W.E. Bentley (2000) A Framework for On-line Optimization of Recombinant Protein Expression in High Cell Density Escherichia coli Cultures using GFP-Fusion Monitoring, Biotechnology and Bioengineering, 69: 275-285.
  5. Gill, R.T., Valdes, J.J., and W.E. Bentley (2000) A Comparative Study of Global Stress Gene Regulation in Response to Overexpression of Recombinant Proteins in Escherichia coli. Metabolic Engineering, 2: 178-189.
  6. DeLisa, M.P., Zhang, Z., Shiloach, M., Pilevar, S., Davis, C.C., Bentley, W.E., and J.S. Sirkis (2000) Evanescent Wave Long Period Fiber Bragg Grating as an Immobilized Antibody Biosensor. Analytical Chemistry, 72:2895-2900.
  7. Gill, R.T., Shiloach, M.S., DeLisa, M.P., Holoman, T.R., and W.E. Bentley (2000) OmpT Expression and Activity Increase in Response to Recombinant Protein Chloramphenicol Acetyltransferase Overexpression and Heat Shock in E. coli. Journal of Microbiology and Molecular Biotechnology. 2:283-289.
  8. Lee, T.-S. , Chan, S.H., Weigand, W.A., and W. E. Bentley (2000) Biocatalytic Transformation of [(2-Hydroxyethyl)thio]acetic Acid and Thiodiglycolic Acid from Thiodiglycol by Alcaligenes xylosoxydans ssp. xylosoxydans (SH91), Biotechnology Progress, 16:363-367.
  9. Srivastava, R., Cha, H.J., Peterson, M.S., and W.E. Bentley (2000) Antisense Downregulation of s32 as a Transient Metabolic Controller in Escherichia coli: Effects on Yield of Active Organophosphorous Hydrolase, Applied and Environmental Microbiology, 66: 4366-4371.
  10. Madurawe, R., Chase, T., Tsao, E.I., and W.E. Bentley (2000) A Recombinant Lipoprotein Antigen Against Lyme Disease Expressed in E. coli: Fermentor Operating Strategies for Improved Yield. Biotechnology Progress, 16:571-576.
  11. Li, J., Wang, S., VanDeusen, W.J., Schultz, L.D., George, H.A., Herber, W.K., Chae, H.J., Bentley, W.E., Rao, G. (2000) Green Fluorescent Protein in Saccharomyces cerevisiae: Real-Time Studies of the GAL1 Promoter, Biotechnology and Bioengineering, 70:187-196.
1999
  1. Pham, M.Q., Naggie, S., Wier, M., Cha, H.J., and W.E. Bentley (1999) Human Interleukin-2 Production in Insect (Trichoplusia ni) Larvae: Effects and Partial Control of Proteolysis, Biotechnology and Bioengineering, 62:175-182.
  2. Cha, H.J., Srivastava, R., Vakharia, V., Rao, G., and W. E. Bentley (1999) Green Fluorescent Protein as a Non-invasive "Stress Probe" in Resting Recombinant Escherichia coli Culture, Applied and Environmental Microbiology, 65:409-414.
  3. Cha, H.J., Dalal, N.G., Vakharia, V.N., and W. E. Bentley (1999) Expression and Purification of Human Interleukin-2 as a Fusion with Green Fluorescent Protein in Suspended Sf-9 Insect Cells, Journal of Biotechnology, 69:9-17.
  4. Cha, H.J., Dalal, N.G., Pham, M.Q., and W.E. Bentley (1999) Purification of Human Interleukin-2 Fusion Protein Produced in Insect Larvae is Facilitated by Fusion with Green Fluorescent Protein and Metal Affinity Ligand, Biotechnology Progress, 15(2), 283-286.
  5. Wang, M.Y., Wang. S.L., Bentley, W.E., and G.C. Liu (1999) Using Glucose Feed to Regulate pH Values of Culture Media and Increase the Production of Baculovirus (BmNPV) and Foreign Protein (HBsAg), Process Biochemistry, 34:295-301.
  6. Ramirez, D.L. and W.E. Bentley (1999) Modeling Inducer and Amino Acid Fed-batch Cultures: Characterization of Cell Stress and Protein Turnover, Journal of Biotechnology, 71:39-58.
  7. Hu, Y.-C., Vakharia, V., Edwards, G., and W. E. Bentley (1999) Chimeric Infectious Bursal Disease Virus-like Particles Expressed in Insect Cells and Purified by Immobilized Metal Affinity Chromatography, Biotechnology and Bioengineering, 63:721-729.
  8. Dalal, N.G., and W. E. Bentley (1999) Mathematical Characterization of Insect Cell (Sf-9) Death in Suspended Culture, Biotechnology Letters, 21: 325-329.
  9. Harcum, S.W., and W. E. Bentley (1999) The Heat-shock and Stringent Responses have Overlapping Protease Activity in E. coli: Implications for Heterologous Protein Yield, Applied Biochemistry and Biotechnology, 80:1-15.
  10. DeLisa, M.P., Li, J.C., Rao, G., Weigand, W.A., and W.E. Bentley (1999) Monitoring GFP-operon Fusion Protein Expression During High Cell Density Cultivation of Escherichia coli Using an On-line Optical Sensor, Biotechnology and Bioengineering, 65:54-64.
  11. Gill, R.T., Valdes, J.J., and W.E. Bentley (1999) RTPCR Differential Display Analysis of Escherichia coli Global Gene Regulation in Response to Heat Shock, Applied and Environmental Microbiology, 65:5386-5393.
  12. Hu, Y.-C. and W.E. Bentley (1999) Enhancing Yield of Infectious Bursal Disease Virus Structural Proteins in Baculovirus Expression Systems: Focus on Media, Protease Inhibitors, and Dissolved Oxygen, Biotechnology Progress, 15:1065-1071.
  13. Cha, H.J, Dalal, N.G., Pham, M.Q., Vakharia, V.N., Rao, G., and W. E. Bentley (1999) Insect Larval Expression Process is Optimized by Generating Fusions with Green Fluorescent Protein, Biotechnology and Bioengineering, 65:316-324.
1998
  1. Gill, R.T., Cha, H.J., Jain, A., Rao, G., and W.E. Bentley (1998) Generating Controlled Reducing Environments in Aerobic Recombinant E. coli Fermentations: Effect on Cell Growth, Oxygen Uptake, and in vivo CAT Activity, Biotechnology and Bioengineering, 59:248-259.
  2. Albano, R., Randers-Eichhorn, L., Bentley, W.E., and G. Rao (1998) Green Fluorescent Protein as a Real Time Quantitative Reporter of Heterologous Protein Production, Biotechnology Progress, 14: 351-354.
  3. Naggie, S. and W.E. Bentley (1998) Appearance of Protease Activities Coincides with p10 and polyhedrin-driven Protein Production in Baculovirus Expression System: Effects on Yield, Biotechnology Progress, 14:227-232.
  4. Gotoh, T., Iwanaga, T., Kikuchi, K, and Bentley, WE (1998) A Novel Support for Membrane Enzyme Immobilization: Gel Beads Containing Polymerized Phospholipid Vesicles, Biotechnology and Applied Biochemistry, 27: 197-204.
  5. Bentley, W.E., Madurawe, R.D., Gill, R.T., Shiloach, M., Chase, T.E., Pulliam-Holoman, T.R., and J.J. Valdes (1998) Generation of a Histidine-Tagged Antibotulinum Toxin Antibody Fragment in E. coli: Effects of Post-induction Temperature on Yield and IMAC Binding-Affinity, Journal of Industrial Microbiology and Biotechnology, 21:275-282.
1997
  1. Pulliam, T. R., Winston, S., and W.E. Bentley (1997) Tryptophan Regulated Expression and Aqueous Two-Phase Separation of Recombinant HIV-Fusion Peptides, Enzyme and Microbial Technology, 20: 47-51.
  2. Lee, T.-S., Weigand, W.A., and W. E. Bentley (1997) Observations of Metabolite Formation and Variable Yield in Thiodiglycol Biodegradation Processes: Impact on Reactor Design, Applied Biochemistry and Biotechnology, 63/65: 743-757.
  3. Hu, Y.C., Wang, M.Y., and W.E. Bentley (1997) A Tubular Bioreactor for the Infection of Insect Cells with Recombinant Baculovirus, Cytotechnology, 24: 143-152.
  4. Randers-Eichhorn, L., Albano, C.R., Sipior, J., Bentley, W.E., and G. Rao (1997) An On-line Green Fluorescent Protein Sensor with LED Excitation, Biotechnology and Bioengineering, 55: 921-927.
  5. Naggie, S., Hu, Y.C., Pulliam-Holoman, T.R., and W.E. Bentley (1997) Substrate (Gelatin) Gel Electrophoretic Method for Analysis of Protease Activity in Insect (Sf-9) Cells, Biotechnology Techniques, 11: 297-301.
  6. Pilon, A., Yost, P., Chase, T. Lohnas, and W.E. Bentley (1997) Ubiquitin Fusion Technology: Bioprocessing of Peptides, Biotechnology Progress, 13:374-379.
  7. Cha, H.J., Pham, M.Q., Rao, G., and W. E. Bentley (1997) Expression of Green Fluorescent Protein in Insect Larvae and its Application for Heterologous Protein Production, Biotechnology and Bioengineering, 56:238-243.
  8. Cha, H.J., Choi, S.S., Yoo, Y.J., and W.E. Bentley (1997) Enhancement of Production of Cloned Glucoamylase under Low Aeration Condition from Recombinant Yeast Using a SUC2 Promoter, Process Biochemistry, 32, 679-684.
  9. Cha, H.J., Gotoh, T., and W. E. Bentley (1997) Simplification of Titer Determination for Recombinant Baculovirus by Green Fluorescent Protein Marker, BioTechniques, 23: 782-786.
1996
  1. Pham, M.Q., Harvey, S.P., Weigand, W.A., and W.E. Bentley (1996) Reactor Comparisons for the Biodegradation of Thiodiglycol, a Product of Mustard Gas Hydrolysis, Applied Biochemistry and Biotechnology, 57/58: 779-789.
  2. Wang, M.Y., Pulliam, T.R., Valle, M., Vakharia, V. and W.E. Bentley (1996) Kinetic Analysis of Alkaline Protease Activity, Recombinant Protein Production and Metabolites for Infected Insect (Sf-9) Cells under Different DO Levels, Journal of Biotechnology, 46: 243-254.
  3. Pilon, A., Yost, P., Chase, T. Lohnas, and W.E. Bentley (1996) High-level Expression and Efficient Recovery of Ubiquitin Fusion Proteins from Escherichia coli, Biotechnology Progress, 12:331-337.
  4. Lee, T.S., Pham, M.Q., Weigand, W.A., Harvey, S.P., and W.E. Bentley (1996) Bioreactor Strategies for the Treatment of Growth-Inhibitory Waste: An Analysis of Thiodiglycol Degradation, the Main Hydrolysis Product of Sulfur Mustard, Biotechnology Progress, 12:533-539.
  5. Albano, R, Randers-Eichhorn, L., Bentley, W.E., and G. Rao (1996) Quantitative Measurement of Green Fluorescent Protein Expression and Chromophore Cyclization, Biotechnology Techniques, 10: 953-958.
1995
  1. Chen, Q., Bentley, W.E. and W. A. Weigand (1995), Optimization for a Recombinant E. coli Fed-Batch Fermentation, Applied Biochemistry and Biotechnology, 51/52: 449-461.
  2. Ko, Y.-F., Bentley, W.E., and W. A. Weigand (1995), The Effect of Cellular Energetics on Foreign Protein Production, Applied Biochemistry and Biotechnology, 50:145-159.
  3. Ramirez, D. M. and W. E. Bentley (1995), Fed-Batch Feeding and Induction Policies that Improve Foreign Protein Synthesis and Stability by Avoiding Stress Responses, Biotechnology and Bioengineering, 47:596-608.
1994
  1. Ko, Y.-F., Bentley, W. E. and W. A. Weigand (1994), A Metabolic Model of Cellular Energetics and Carbon Flux During Aerobic E. coli Fermentation, Biotechnology and Bioengineering, 43:847-855 .
  2. Wang, M.-Y., Bentley, W. E. and V. Vakharia (1994), Purification of a Recombinant Protein Produced in a Baculovirus Expression System by Immobilized Metal Affinity Chromatography, Biotechnology and Bioengineering 43: 349-356.
  3. Wang, M.-Y. and W. E. Bentley (1994), Continuous Insect Cell (Sf-9) Culture with Aeration through Sparging, Applied Microbiology and Biotechnology 41:317-323.
  4. Bentley, W. E., Wang, M.-Y. and V. Vakharia (1994), Development of an Efficient Bioprocess for Poultry Vaccines Using High Density Insect Cell Culture, Annals New York Academy of Sciences 745:336-359.
  5. Bentley, W.E. (1994), Undergraduate Researchers within a Biochemical Engineering Research Program: Factors Influencing Research Quality and Learning Experience, Annual Conference Proceedings, American Society for Engineering Education, 1994(1):1461-1464.
  6. Bentley, W.E., Kebede B., Franey, T., and M.Y. Wang (1994), Segregated Characterization of Recombinant Epoxide Hydrolase Synthesis via the Baculovirus / Insect Cell Expression System, Chemical Engineering Science. 49:4133-4141.
  7. Pulliam, T. R., Winston, S. and W.E. Bentley (1994), Expression and Aqueous Two-Phase Separation of HIV582-b-gal Fusion Protein, Journal of Long-Term Effects of Medical Implants. 4(1): 56.
1993
  1. Ramirez, D. M. and W. E. Bentley (1993), Enhancement of Recombinant Protein Synthesis and Stability via Coordinated Amino Acid Addition, Biotechnology and Bioengineering, 41:557-565.
  2. Wang, M.-Y., Kwong, S., and W. E. Bentley (1993), Effects of Oxygen/Glucose/Glutamine Feeding on Insect Cell Baculovirus Expression: A Study of Epoxide Hydrolase Production, Biotechnology Progress, 9:355-361.
  3. Wang, M.-Y., Vakharia, V., and W. E. Bentley (1993), Expression of Epoxide Hydrolase in Insect Cells: A Focus on the Infected Cell, Biotechnology and Bioengineering, 42:240-246.
  4. Bentley, W. E. and O. E. Quiroga (1993), Investigations of Subpopulation Heterogeneity and Plasmid Stability in Recombinant E. coli via a Simple Segregated Model, Biotechnology and Bioengineering, 42:222-234.
  5. Ko, Y.-F., Bentley, W. E. and W. A. Weigand (1993), An Integrated Metabolic Modeling Approach to Describe the Energy Efficiency of E. coli Under Oxygen-Limited Conditions: Cellular Energetics and Carbon Flux, Biotechnology and Bioengineering, 42:843-853.
  6. Harcum, S. W. and W. E. Bentley (1993), Detection, Quantification, and Characterization of Proteases in Recombinant Escherichia coli, Biotechnology Techniques, 7:441-447.
  7. Harcum, S. W. and W. E. Bentley (1993), Response Dynamics of 26, 34, 39, 54, and 80 kDa Proteases in Induced Cultures of Recombinant Escherichia coli, Biotechnology and Bioengineering, 42:675-685.
  8. Wang, M.-Y., Wester, K. and W. E. Bentley (1993), Glutamine Determination in Insect Cell Culture Media, Biotechnology Techniques, 7:841-846.
1992
  1. Harcum, S. W., Ramirez, D. M. and W. E. Bentley (1992), Optimal Nutrient Feed Policies for Heterologous Protein Production, Applied Biochemistry and Biotechnology, 34/35:161-173.
  2. Bentley, W. E., Davis, R. H. and D. S. Kompala (1991), Dynamics of Induced CAT Expression in E. coli, Biotechnology and Bioengineering, 38:749-760.
  3. Bentley, W. E. and D. S. Kompala (1990), Stability in Recombinant Continuous Cultures - A Metabolic Approach, Biotechnology Letters, 12(5):329-334.
  4. Bentley, W. E. and D. S. Kompala (1990), Plasmid Instability in Batch Cultures of Recombinant Bacteria: A Laboratory Experiment, Chemical Engineering Education, 24(3):168-172.
  5. Bentley, W. E. and D. S. Kompala (1990), Optimal Induction of Protein Expression in Recombinant Bacterial Cultures, in Biochemical Engineering VI, Annals New York Academy of Sciences, 589:120-138.
  6. Bentley, W.E., Mirjalili, N., Andersen, D. C., Kompala, D. S. and R. H. Davis (1990), Plasmid Encoded Protein: The Principal Factor in the "Metabolic Burden" Associated with Recombinant Bacteria, Biotechnology and Bioengineering, 35(7):668-681.
  7. Bentley, W. E. and D. S. Kompala (1989), A Novel Structured Kinetic Modeling Approach for the Analysis of Plasmid Instability in Recombinant Bacterial Cultures, Biotechnology and Bioengineering, 33(1): 49-61.